close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTBLymphotoxin beta. (246 aa)    
Predicted Functional Partners:
LTA
Lymphotoxin alpha.
   
 0.999
LTBR
Lymphotoxin beta receptor.
    
 0.996
TNFSF13B
TNF superfamily member 13b.
   
 
 0.799
CD40
CD40 molecule.
   
 0.796
ENSCWAP00000014628
annotation not available
   
 0.794
TNFRSF11B
TNF receptor superfamily member 11b.
    
 0.784
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
   
 
 0.735
CCR7
C-C motif chemokine receptor 7.
   
  
 0.727
TNFRSF1A
TNF receptor superfamily member 1A.
   
 0.697
ENSCWAP00000006243
annotation not available
      
 0.684
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.