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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGHMBP2Immunoglobulin mu DNA binding protein 2. (989 aa)    
Predicted Functional Partners:
ABT1
Activator of basal transcription 1.
    
 
 0.795
ENSCWAP00000005308
annotation not available
     
 0.760
GDAP1
Ganglioside induced differentiation associated protein 1.
      
 0.753
NELFE
Negative elongation factor complex member E.
    
   0.704
BSCL2
BSCL2 lipid droplet biogenesis associated, seipin.
      
 0.684
SH3TC2
SH3 domain and tetratricopeptide repeats 2.
      
 0.678
ZC4H2
Zinc finger C4H2-type containing.
      
 0.641
ENSCWAP00000025385
annotation not available
   
    0.637
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
     
 0.614
PIF1
PIF1 5'-to-3' DNA helicase.
      
 0.608
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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