STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPM1HProtein phosphatase, Mg2+/Mn2+ dependent 1H. (514 aa)    
Predicted Functional Partners:
RAB29
RAB29, member RAS oncogene family.
    
 
 0.910
RAB10
RAB10, member RAS oncogene family.
    
 
 0.899
RILPL2
Rab interacting lysosomal protein like 2.
      
 0.887
RAB35
RAB35, member RAS oncogene family.
    
 
 0.813
ACBD3
acyl-CoA binding domain containing 3.
    
 
 0.733
RAB7A
RAB7A, member RAS oncogene family.
    
 
 0.673
RAB8B
RAB8B, member RAS oncogene family.
    
 
 0.665
RILPL1
Rab interacting lysosomal protein like 1.
      
 0.660
RAB8A
RAB8A, member RAS oncogene family.
    
 
 0.645
RAB32
RAB32, member RAS oncogene family.
    
 
 0.626
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.