Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MACF1Microtubule actin crosslinking factor 1. (7585 aa)    
Predicted Functional Partners:
JUP
Junction plakoglobin.
   
 0.982
PKP2
Plakophilin 2.
   
 0.962
PKP1
Plakophilin 1.
   
 0.952
ITGB4
Integrin subunit beta 4.
   
 0.924
ENSCWAP00000016290
annotation not available
    
  0.905
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 0.899
DSC1
Desmocollin 1.
   
 0.888
DSC2
Desmocollin 2.
   
 0.888
DSC3
Desmocollin 3.
   
 0.888
DSG1
Desmoglein 1.
    
 0.886
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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