STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH8alkB homolog 8, tRNA methyltransferase. (666 aa)    
Predicted Functional Partners:
ENSCWAP00000011865
annotation not available
   
 
 0.922
ENSCWAP00000023188
annotation not available
   
 
 0.922
ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
      
 0.816
ALKBH1
alkB homolog 1, histone H2A dioxygenase.
      
 0.792
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.743
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor.
      
 0.734
NHEJ1
Non-homologous end joining factor 1.
      
 0.671
ALKBH7
alkB homolog 7.
      
 0.632
AFDN
Afadin, adherens junction formation factor.
    
  0.607
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
      
 0.605
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.