ERAL1 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAP3	ERAL1	ENSCWAP00000027601	ENSCWAP00000007104	Death associated protein 3.	Era like 12S mitochondrial rRNA chaperone 1.	0.996
DAP3	MRPS16	ENSCWAP00000027601	ENSCWAP00000029177	Death associated protein 3.	Mitochondrial ribosomal protein S16.	0.998
DAP3	MRPS2	ENSCWAP00000027601	ENSCWAP00000004886	Death associated protein 3.	Mitochondrial ribosomal protein S2.	0.999
DAP3	MRPS22	ENSCWAP00000027601	ENSCWAP00000017334	Death associated protein 3.	Mitochondrial ribosomal protein S22.	0.999
DAP3	MRPS26	ENSCWAP00000027601	ENSCWAP00000016949	Death associated protein 3.	Mitochondrial ribosomal protein S26.	0.998
DAP3	MRPS27	ENSCWAP00000027601	ENSCWAP00000001870	Death associated protein 3.	Mitochondrial ribosomal protein S27.	0.999
DAP3	MRPS5	ENSCWAP00000027601	ENSCWAP00000007161	Death associated protein 3.	Mitochondrial ribosomal protein S5.	0.999
DAP3	MRPS6	ENSCWAP00000027601	ENSCWAP00000003840	Death associated protein 3.	Mitochondrial ribosomal protein S6.	0.998
DAP3	MRPS7	ENSCWAP00000027601	ENSCWAP00000024549	Death associated protein 3.	Mitochondrial ribosomal protein S7.	0.998
DAP3	MRPS9	ENSCWAP00000027601	ENSCWAP00000002937	Death associated protein 3.	Mitochondrial ribosomal protein S9.	0.999
ERAL1	DAP3	ENSCWAP00000007104	ENSCWAP00000027601	Era like 12S mitochondrial rRNA chaperone 1.	Death associated protein 3.	0.996
ERAL1	MRPS16	ENSCWAP00000007104	ENSCWAP00000029177	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein S16.	0.991
ERAL1	MRPS2	ENSCWAP00000007104	ENSCWAP00000004886	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein S2.	0.992
ERAL1	MRPS22	ENSCWAP00000007104	ENSCWAP00000017334	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein S22.	0.995
ERAL1	MRPS26	ENSCWAP00000007104	ENSCWAP00000016949	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein S26.	0.993
ERAL1	MRPS27	ENSCWAP00000007104	ENSCWAP00000001870	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein S27.	0.997
ERAL1	MRPS5	ENSCWAP00000007104	ENSCWAP00000007161	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein S5.	0.989
ERAL1	MRPS6	ENSCWAP00000007104	ENSCWAP00000003840	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein S6.	0.990
ERAL1	MRPS7	ENSCWAP00000007104	ENSCWAP00000024549	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein S7.	0.997
ERAL1	MRPS9	ENSCWAP00000007104	ENSCWAP00000002937	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein S9.	0.991