Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIOK3RIO kinase 3. (519 aa)    
Predicted Functional Partners:
ENSCWAP00000001437
annotation not available
   
 0.990
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.979
TSR1
TSR1 ribosome maturation factor.
   
 0.978
RIOK1
RIO kinase 1.
    
0.949
RPS5
Ribosomal protein S5.
   
 0.944
PNO1
Partner of NOB1 homolog.
   
 0.941
RPS17
Ribosomal protein S17.
    
 0.937
RIOK2
RIO kinase 2.
   
0.930
BYSL
Bystin like.
   
 0.929
RPS21
Ribosomal protein S21.
    
 0.926
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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