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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFAP1L1Actin filament associated protein 1 like 1. (765 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
      
 0.758
SYT10
Synaptotagmin 10.
      
 0.758
TDRD5
Tudor domain containing 5.
      
 0.749
RPH3AL
Rabphilin 3A like (without C2 domains).
      
 0.739
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.677
PCYOX1L
Prenylcysteine oxidase 1 like.
      
 0.676
CNTN6
Contactin 6.
      
 0.644
CLINT1
Clathrin interactor 1.
      
 0.621
ADGRF5
Adhesion G protein-coupled receptor F5.
   
    0.597
ABLIM3
Actin binding LIM protein family member 3.
   
  
 0.587
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.