Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRFN5Leucine rich repeat and fibronectin type III domain containing 5. (719 aa)    
Predicted Functional Partners:
DLG4
Discs large MAGUK scaffold protein 4.
    
 0.782
NTNG1
Netrin G1.
    
 0.719
TRAPPC6B
Trafficking protein particle complex 6B.
   
  
 0.677
DLG2
Discs large MAGUK scaffold protein 2.
    
 0.669
DLG1
Discs large MAGUK scaffold protein 1.
    
 0.669
PNN
Pinin, desmosome associated protein.
      
 0.645
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2.
   
 
 0.635
DLG3
Discs large MAGUK scaffold protein 3.
    
 0.610
LRRC61
Leucine rich repeat containing 61.
    
 
 0.601
ENSCWAP00000005624
annotation not available
    
 
 0.599
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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