Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KDM3ALysine demethylase 3A. (1323 aa)    
Predicted Functional Partners:
KDM3B
Lysine demethylase 3B.
   
  0.982
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.929
SYMPK
Symplekin.
   
   0.926
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
   
 
 0.905
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
   
 
 0.905
ARID1A
AT-rich interaction domain 1A.
   
 
 0.903
SMARCC1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
   
 
 0.901
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
     
 0.896
SMARCD1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
     
 0.894
ARID1B
AT-rich interaction domain 1B.
   
 
 0.883
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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