Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNAI1Snail family transcriptional repressor 1. (264 aa)    
Predicted Functional Partners:
KDM1A
Lysine demethylase 1A.
    
 0.976
RCOR1
REST corepressor 1.
    
 0.970
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
    
 0.961
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.960
FBXL14
F-box and leucine rich repeat protein 14.
   
 
 0.958
EP300
E1A binding protein p300.
    
 
 0.956
DNMT1
DNA methyltransferase 1.
    
 
 0.951
USP10
Ubiquitin specific peptidase 10.
    
   0.948
HMG20A
High mobility group 20A.
    
   0.948
HMG20B
High mobility group 20B.
    
   0.948
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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