STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTRF1LMitochondrial translational release factor 1 like. (380 aa)    
Predicted Functional Partners:
HEMK1
HemK methyltransferase family member 1.
  
 
 0.943
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 0.879
FZR1
Fizzy and cell division cycle 20 related 1.
    
 0.874
CUL1
Cullin 1.
    
  0.870
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
  
 
 0.865
CDC20B
Cell division cycle 20B.
    
 0.859
CDC20
Cell division cycle 20.
    
 0.859
FBXW11
F-box and WD repeat domain containing 11.
    
 0.845
INSYN2A
Inhibitory synaptic factor 2A.
      
 0.830
MRPL58
Mitochondrial ribosomal protein L58.
   
 0.819
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.