KCNK5 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KCNE3	KCNJ13	ENSCWAP00000002935	ENSCWAP00000028650	Potassium voltage-gated channel subfamily E regulatory subunit 3.	Potassium inwardly rectifying channel subfamily J member 13.	0.902
KCNE3	KCNK1	ENSCWAP00000002935	ENSCWAP00000023558	Potassium voltage-gated channel subfamily E regulatory subunit 3.	Potassium two pore domain channel subfamily K member 1.	0.410
KCNE3	KCNK10	ENSCWAP00000002935	ENSCWAP00000007616	Potassium voltage-gated channel subfamily E regulatory subunit 3.	Potassium two pore domain channel subfamily K member 10.	0.480
KCNE3	KCNK18	ENSCWAP00000002935	ENSCWAP00000024933	Potassium voltage-gated channel subfamily E regulatory subunit 3.	Potassium two pore domain channel subfamily K member 18.	0.768
KCNE3	KCNK4	ENSCWAP00000002935	ENSCWAP00000023381	Potassium voltage-gated channel subfamily E regulatory subunit 3.	Potassium two pore domain channel subfamily K member 4.	0.804
KCNE3	KCNK5	ENSCWAP00000002935	ENSCWAP00000007197	Potassium voltage-gated channel subfamily E regulatory subunit 3.	Potassium two pore domain channel subfamily K member 5.	0.909
KCNE3	KCNN4	ENSCWAP00000002935	ENSCWAP00000007049	Potassium voltage-gated channel subfamily E regulatory subunit 3.	Potassium calcium-activated channel subfamily N member 4.	0.922
KCNE3	KCNQ3	ENSCWAP00000002935	ENSCWAP00000025482	Potassium voltage-gated channel subfamily E regulatory subunit 3.	Potassium voltage-gated channel subfamily Q member 3.	0.927
KCNE3	KCNQ4	ENSCWAP00000002935	ENSCWAP00000015674	Potassium voltage-gated channel subfamily E regulatory subunit 3.	Potassium voltage-gated channel subfamily Q member 4.	0.955
KCNE3	KCNQ5	ENSCWAP00000002935	ENSCWAP00000010771	Potassium voltage-gated channel subfamily E regulatory subunit 3.	Potassium voltage-gated channel subfamily Q member 5.	0.933
KCNJ13	KCNE3	ENSCWAP00000028650	ENSCWAP00000002935	Potassium inwardly rectifying channel subfamily J member 13.	Potassium voltage-gated channel subfamily E regulatory subunit 3.	0.902
KCNJ13	KCNK10	ENSCWAP00000028650	ENSCWAP00000007616	Potassium inwardly rectifying channel subfamily J member 13.	Potassium two pore domain channel subfamily K member 10.	0.498
KCNJ13	KCNK18	ENSCWAP00000028650	ENSCWAP00000024933	Potassium inwardly rectifying channel subfamily J member 13.	Potassium two pore domain channel subfamily K member 18.	0.604
KCNJ13	KCNK4	ENSCWAP00000028650	ENSCWAP00000023381	Potassium inwardly rectifying channel subfamily J member 13.	Potassium two pore domain channel subfamily K member 4.	0.828
KCNJ13	KCNK5	ENSCWAP00000028650	ENSCWAP00000007197	Potassium inwardly rectifying channel subfamily J member 13.	Potassium two pore domain channel subfamily K member 5.	0.940
KCNJ13	KCNN4	ENSCWAP00000028650	ENSCWAP00000007049	Potassium inwardly rectifying channel subfamily J member 13.	Potassium calcium-activated channel subfamily N member 4.	0.916
KCNJ13	KCNQ3	ENSCWAP00000028650	ENSCWAP00000025482	Potassium inwardly rectifying channel subfamily J member 13.	Potassium voltage-gated channel subfamily Q member 3.	0.809
KCNJ13	KCNQ4	ENSCWAP00000028650	ENSCWAP00000015674	Potassium inwardly rectifying channel subfamily J member 13.	Potassium voltage-gated channel subfamily Q member 4.	0.809
KCNJ13	KCNQ5	ENSCWAP00000028650	ENSCWAP00000010771	Potassium inwardly rectifying channel subfamily J member 13.	Potassium voltage-gated channel subfamily Q member 5.	0.809
KCNK1	KCNE3	ENSCWAP00000023558	ENSCWAP00000002935	Potassium two pore domain channel subfamily K member 1.	Potassium voltage-gated channel subfamily E regulatory subunit 3.	0.410