STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM126ATransmembrane protein 126A. (196 aa)    
Predicted Functional Partners:
APOO
Apolipoprotein O.
   
   0.853
SSBP1
Single stranded DNA binding protein 1.
   
 
 0.852
ENSCWAP00000028772
annotation not available
   
    0.821
TMEM109
Transmembrane protein 109.
      
 0.818
ECSIT
ECSIT signaling integrator.
     
 0.817
ACADVL
acyl-CoA dehydrogenase very long chain.
     
 0.778
ENSCWAP00000014650
annotation not available
   
    0.771
ACAD9
acyl-CoA dehydrogenase family member 9.
     
 0.766
TMEM41A
Transmembrane protein 41A.
      
 0.763
SEC11C
SEC11 homolog C, signal peptidase complex subunit.
   
  
 0.761
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.