IFNL1 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

IFNL1

Interferon lambda 1. (191 aa)

Predicted Functional Partners:

IFNLR1

0.998

IFNB1

0.978

IL10RB

0.970

IFNAR1

0.965

IFNE

0.938

ENSCWAP00000021466

0.933

ENSCWAP00000021654

0.933

ENSCWAP00000003407

0.924

JAK1

0.920

ENSCWAP00000016772

0.903

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCWAP00000003407	ENSCWAP00000016772	ENSCWAP00000003407	ENSCWAP00000016772	annotation not available	annotation not available	0.943
ENSCWAP00000003407	ENSCWAP00000021466	ENSCWAP00000003407	ENSCWAP00000021466	annotation not available	annotation not available	0.869
ENSCWAP00000003407	ENSCWAP00000021654	ENSCWAP00000003407	ENSCWAP00000021654	annotation not available	annotation not available	0.869
ENSCWAP00000003407	IFNAR1	ENSCWAP00000003407	ENSCWAP00000003451	annotation not available	Interferon alpha and beta receptor subunit 1.	0.998
ENSCWAP00000003407	IFNB1	ENSCWAP00000003407	ENSCWAP00000016727	annotation not available	Interferon beta 1.	0.996
ENSCWAP00000003407	IFNE	ENSCWAP00000003407	ENSCWAP00000017467	annotation not available	Interferon epsilon.	0.962
ENSCWAP00000003407	IFNL1	ENSCWAP00000003407	ENSCWAP00000007250	annotation not available	Interferon lambda 1.	0.924
ENSCWAP00000003407	IFNLR1	ENSCWAP00000003407	ENSCWAP00000005925	annotation not available	Interferon lambda receptor 1.	0.949
ENSCWAP00000003407	IL10RB	ENSCWAP00000003407	ENSCWAP00000003432	annotation not available	Interleukin 10 receptor subunit beta.	0.992
ENSCWAP00000003407	JAK1	ENSCWAP00000003407	ENSCWAP00000013140	annotation not available	Janus kinase 1.	0.997
ENSCWAP00000016772	ENSCWAP00000003407	ENSCWAP00000016772	ENSCWAP00000003407	annotation not available	annotation not available	0.943
ENSCWAP00000016772	ENSCWAP00000021466	ENSCWAP00000016772	ENSCWAP00000021466	annotation not available	annotation not available	0.856
ENSCWAP00000016772	ENSCWAP00000021654	ENSCWAP00000016772	ENSCWAP00000021654	annotation not available	annotation not available	0.856
ENSCWAP00000016772	IFNAR1	ENSCWAP00000016772	ENSCWAP00000003451	annotation not available	Interferon alpha and beta receptor subunit 1.	0.948
ENSCWAP00000016772	IFNB1	ENSCWAP00000016772	ENSCWAP00000016727	annotation not available	Interferon beta 1.	0.882
ENSCWAP00000016772	IFNE	ENSCWAP00000016772	ENSCWAP00000017467	annotation not available	Interferon epsilon.	0.874
ENSCWAP00000016772	IFNL1	ENSCWAP00000016772	ENSCWAP00000007250	annotation not available	Interferon lambda 1.	0.903
ENSCWAP00000016772	IFNLR1	ENSCWAP00000016772	ENSCWAP00000005925	annotation not available	Interferon lambda receptor 1.	0.893
ENSCWAP00000016772	IL10RB	ENSCWAP00000016772	ENSCWAP00000003432	annotation not available	Interleukin 10 receptor subunit beta.	0.901
ENSCWAP00000016772	JAK1	ENSCWAP00000016772	ENSCWAP00000013140	annotation not available	Janus kinase 1.	0.898