STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUFT1Tuftelin 1. (391 aa)    
Predicted Functional Partners:
ZYX
Zyxin.
    
   0.945
SMC6
Structural maintenance of chromosomes 6.
    
 
 0.930
RABGAP1L
RAB GTPase activating protein 1 like.
    
 
 0.846
RABGAP1
RAB GTPase activating protein 1.
    
 
 0.846
TFIP11
Tuftelin interacting protein 11.
    
 
 0.839
ENAM
Enamelin.
      
 0.808
AMBN
Ameloblastin.
      
 0.806
KLK4
Kallikrein related peptidase 4.
      
 0.756
NSMCE4A
NSE4 homolog A, SMC5-SMC6 complex component.
    
   0.732
TRPM5
Transient receptor potential cation channel subfamily M member 5.
      
 0.657
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.