STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPACA9Sperm acrosome associated 9. (222 aa)    
Predicted Functional Partners:
CFAP161
Cilia and flagella associated protein 161.
   
 
 0.955
EFHC2
EF-hand domain containing 2.
   
 
 0.945
RIBC2
RIB43A domain with coiled-coils 2.
   
 
 0.943
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.943
EFHC1
EF-hand domain containing 1.
   
 
 0.942
ENKUR
Enkurin, TRPC channel interacting protein.
   
 
 0.941
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.941
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.940
ENSCWAP00000028616
annotation not available
   
 
 0.937
CCDC173
Coiled-coil domain containing 173.
    
 
 0.936
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.