Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGFB1I1Transforming growth factor beta 1 induced transcript 1. (456 aa)    
Predicted Functional Partners:
PTK2B
Protein tyrosine kinase 2 beta.
    
 0.995
PTK2
Protein tyrosine kinase 2.
    
 0.991
VCL
Vinculin.
    
 0.987
ILK
Integrin linked kinase.
   
 0.979
CRK
CRK proto-oncogene, adaptor protein.
    
 0.974
BCAR1
BCAR1 scaffold protein, Cas family member.
    
 0.970
GIT1
GIT ArfGAP 1.
    
 0.969
CRKL
CRK like proto-oncogene, adaptor protein.
    
 0.960
RUFY1
RUN and FYVE domain containing 1.
   
    0.959
ITGA4
Integrin subunit alpha 4.
    
 0.957
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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