STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRDNTriadin. (728 aa)    
Predicted Functional Partners:
RYR1
Ryanodine receptor 1.
   
 0.998
CASQ2
Calsequestrin 2.
   
 0.996
ENSCWAP00000012064
annotation not available
   
 0.995
RYR2
Ryanodine receptor 2.
   
 0.994
RYR3
Ryanodine receptor 3.
   
 0.988
ASPH
Aspartate beta-hydroxylase.
   
 
 0.986
HRC
Histidine rich calcium binding protein.
   
 0.964
EMC10
ER membrane protein complex subunit 10.
    
 
 0.935
EMC2
ER membrane protein complex subunit 2.
    
   0.908
CMYA5
Cardiomyopathy associated 5.
   
 
 0.901
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.