ST6GALNAC3 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ST6GALNAC3

ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3. (305 aa)

Predicted Functional Partners:

ST6GALNAC1

0.952

ST3GAL2

0.950

ST3GAL1

0.950

ST8SIA5

0.941

ST6GALNAC2

0.931

ST8SIA6

0.920

ST6GALNAC4

0.890

ST6GALNAC5

0.836

ENSCWAP00000024259

0.835

GALNT7

0.690

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCWAP00000024259	GALNT7	ENSCWAP00000024259	ENSCWAP00000021976	annotation not available	Polypeptide N-acetylgalactosaminyltransferase 7.	0.730
ENSCWAP00000024259	ST3GAL1	ENSCWAP00000024259	ENSCWAP00000026531	annotation not available	ST3 beta-galactoside alpha-2,3-sialyltransferase 1.	0.933
ENSCWAP00000024259	ST3GAL2	ENSCWAP00000024259	ENSCWAP00000001961	annotation not available	ST3 beta-galactoside alpha-2,3-sialyltransferase 2.	0.933
ENSCWAP00000024259	ST6GALNAC1	ENSCWAP00000024259	ENSCWAP00000026732	annotation not available	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1.	0.819
ENSCWAP00000024259	ST6GALNAC2	ENSCWAP00000024259	ENSCWAP00000026767	annotation not available	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2.	0.780
ENSCWAP00000024259	ST6GALNAC3	ENSCWAP00000024259	ENSCWAP00000007348	annotation not available	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3.	0.835
ENSCWAP00000024259	ST6GALNAC4	ENSCWAP00000024259	ENSCWAP00000024140	annotation not available	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4.	0.846
ENSCWAP00000024259	ST6GALNAC5	ENSCWAP00000024259	ENSCWAP00000007303	annotation not available	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5.	0.863
ENSCWAP00000024259	ST8SIA5	ENSCWAP00000024259	ENSCWAP00000012236	annotation not available	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5.	0.952
ENSCWAP00000024259	ST8SIA6	ENSCWAP00000024259	ENSCWAP00000020524	annotation not available	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6.	0.925
GALNT7	ENSCWAP00000024259	ENSCWAP00000021976	ENSCWAP00000024259	Polypeptide N-acetylgalactosaminyltransferase 7.	annotation not available	0.730
GALNT7	ST3GAL1	ENSCWAP00000021976	ENSCWAP00000026531	Polypeptide N-acetylgalactosaminyltransferase 7.	ST3 beta-galactoside alpha-2,3-sialyltransferase 1.	0.639
GALNT7	ST3GAL2	ENSCWAP00000021976	ENSCWAP00000001961	Polypeptide N-acetylgalactosaminyltransferase 7.	ST3 beta-galactoside alpha-2,3-sialyltransferase 2.	0.651
GALNT7	ST6GALNAC1	ENSCWAP00000021976	ENSCWAP00000026732	Polypeptide N-acetylgalactosaminyltransferase 7.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1.	0.908
GALNT7	ST6GALNAC3	ENSCWAP00000021976	ENSCWAP00000007348	Polypeptide N-acetylgalactosaminyltransferase 7.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3.	0.690
GALNT7	ST6GALNAC4	ENSCWAP00000021976	ENSCWAP00000024140	Polypeptide N-acetylgalactosaminyltransferase 7.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4.	0.572
ST3GAL1	ENSCWAP00000024259	ENSCWAP00000026531	ENSCWAP00000024259	ST3 beta-galactoside alpha-2,3-sialyltransferase 1.	annotation not available	0.933
ST3GAL1	GALNT7	ENSCWAP00000026531	ENSCWAP00000021976	ST3 beta-galactoside alpha-2,3-sialyltransferase 1.	Polypeptide N-acetylgalactosaminyltransferase 7.	0.639
ST3GAL1	ST3GAL2	ENSCWAP00000026531	ENSCWAP00000001961	ST3 beta-galactoside alpha-2,3-sialyltransferase 1.	ST3 beta-galactoside alpha-2,3-sialyltransferase 2.	0.890
ST3GAL1	ST6GALNAC1	ENSCWAP00000026531	ENSCWAP00000026732	ST3 beta-galactoside alpha-2,3-sialyltransferase 1.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1.	0.921