STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFFADNA fragmentation factor subunit alpha. (330 aa)    
Predicted Functional Partners:
DFFB
DNA fragmentation factor subunit beta.
    
 0.999
CASP3
Caspase 3.
    
 0.995
CASP7
Caspase 7.
    
 0.943
CENPU
Centromere protein U.
    
 0.939
ENSCWAP00000015489
annotation not available
    
 0.939
GZMB
Granzyme B.
    
 0.868
CTSG
Cathepsin G.
    
 0.866
CASP6
Caspase 6.
    
 0.848
ENSCWAP00000008158
annotation not available
    
 0.842
CASP14
Caspase 14.
    
 0.842
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.