STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STOML3Stomatin like 3. (292 aa)    
Predicted Functional Partners:
ASIC3
Acid sensing ion channel subunit 3.
    
 0.830
RIC8B
RIC8 guanine nucleotide exchange factor B.
   
  
 0.813
ENSCWAP00000009174
annotation not available
    
 
 0.794
FLOT2
Flotillin 2.
   
 
 0.777
BCS1L
BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone.
   
 0.729
SCNN1A
Sodium channel epithelial 1 alpha subunit.
    
 0.722
ASIC4
Acid sensing ion channel subunit family member 4.
    
 0.715
C1QBP
Complement C1q binding protein.
   
 0.713
YME1L1
YME1 like 1 ATPase.
   
 0.713
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
   
 0.707
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.