STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TENT4ATerminal nucleotidyltransferase 4A. (791 aa)    
Predicted Functional Partners:
TENT4B
Terminal nucleotidyltransferase 4B.
    
0.990
ZCCHC7
Zinc finger CCHC-type containing 7.
   
 0.976
MTREX
Mtr4 exosome RNA helicase.
   
 0.968
EXOSC10
Exosome component 10.
   
 0.941
ZNFX1
Zinc finger NFX1-type containing 1.
    
 
 0.831
PUM3
Pumilio RNA binding family member 3.
   
   0.809
PABPN1
poly(A) binding protein nuclear 1.
    
 
 0.800
ARMC8
Armadillo repeat containing 8.
    
   0.794
EXOSC5
Exosome component 5.
   
 0.782
DHX15
DEAH-box helicase 15.
   
 
 0.780
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.