STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMODUromodulin. (635 aa)    
Predicted Functional Partners:
PPY
Pancreatic polypeptide.
   
   0.871
ENSCWAP00000018013
annotation not available
   
 
 0.855
ITGB6
Integrin subunit beta 6.
    
 0.791
CEL
Carboxyl ester lipase.
   
   0.728
SLC34A1
Solute carrier family 34 member 1.
   
 
 0.669
AQP2
Aquaporin 2.
   
 
 0.669
FRMD6
FERM domain containing 6.
    
 0.645
TGFB1
Transforming growth factor beta 1.
    
 0.641
ENSCWAP00000009174
annotation not available
    
 
 0.637
NCSTN
Nicastrin.
    
 0.625
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.