STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLPBClpB homolog, mitochondrial AAA ATPase chaperonin. (702 aa)    
Predicted Functional Partners:
CLPP
Caseinolytic mitochondrial matrix peptidase proteolytic subunit.
  
 
 0.972
STIP1
Stress induced phosphoprotein 1.
   
 
 0.953
UCHL3
Ubiquitin C-terminal hydrolase L3.
   
   0.948
GRPEL1
GrpE like 1, mitochondrial.
  
 
 0.943
GSPT2
G1 to S phase transition 2.
    
 
 0.922
GRPEL2
GrpE like 2, mitochondrial.
  
 
 0.896
TRAP1
TNF receptor associated protein 1.
  
 
 0.892
TSC1
TSC complex subunit 1.
  
 
 0.892
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
  
 
 0.892
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
  
 
 0.892
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.