Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000007488annotation not available (913 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.629
ENSCWAP00000014826
annotation not available
    
 
 0.590
TMED3
Transmembrane p24 trafficking protein 3.
      
 0.590
NAB1
NGFI-A binding protein 1.
    
 0.582
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.566
TRIM33
Tripartite motif containing 33.
    
 0.553
TRIM24
Tripartite motif containing 24.
    
 0.553
TRIM28
Tripartite motif containing 28.
    
 0.553
FGFR1OP2
FGFR1 oncogene partner 2.
    
 
 0.550
ENSCWAP00000002739
annotation not available
    
 
 0.532
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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