Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMPDL3ASphingomyelin phosphodiesterase acid like 3A. (453 aa)    
Predicted Functional Partners:
GSTT4
Glutathione S-transferase theta 4.
      
 0.781
BTBD10
BTB domain containing 10.
      
 0.754
BRINP1
BMP/retinoic acid inducible neural specific 1.
      
 0.740
ENSCWAP00000010129
annotation not available
      
 0.698
ZNF330
Zinc finger protein 330.
      
 0.638
FAM227A
Family with sequence similarity 227 member A.
      
 0.617
RBM48
RNA binding motif protein 48.
      
 0.609
LRRC39
Leucine rich repeat containing 39.
      
 0.584
KCTD20
Potassium channel tetramerization domain containing 20.
      
 0.584
ZNF574
Zinc finger protein 574.
      
 0.584
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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