Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MNX1Motor neuron and pancreas homeobox 1. (398 aa)    
Predicted Functional Partners:
TBX20
T-box transcription factor 20.
    
 
 0.649
VIPR1
Vasoactive intestinal peptide receptor 1.
      
 0.638
PTF1A
Pancreas associated transcription factor 1a.
    
 
 0.622
FOXA2
Forkhead box A2.
    
 
 0.609
TSPAN2
Tetraspanin 2.
      
 0.602
GLIS3
GLIS family zinc finger 3.
    
 
 0.597
RFX4
Regulatory factor X4.
      
 0.587
GDF15
Growth differentiation factor 15.
      
 0.585
CNIH2
Cornichon family AMPA receptor auxiliary protein 2.
      
 0.584
LMBR1
Limb development membrane protein 1.
      
 0.583
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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