Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM147Transmembrane protein 147. (224 aa)    
Predicted Functional Partners:
NCLN
Nicalin.
    
 0.994
CCDC47
Coiled-coil domain containing 47.
   
 0.974
TMCO1
Transmembrane and coiled-coil domains 1.
   
 0.974
TESMIN
Testis expressed metallothionein like protein.
   
 0.948
LIN54
Lin-54 DREAM MuvB core complex component.
   
 0.948
WDR83OS
WD repeat domain 83 opposite strand.
   
 0.946
LIN52
Lin-52 DREAM MuvB core complex component.
   
 0.936
EMC6
ER membrane protein complex subunit 6.
   
 
 0.921
EMC3
ER membrane protein complex subunit 3.
    
 
 0.913
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.899
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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