Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSH4mutS homolog 4. (935 aa)    
Predicted Functional Partners:
ENSCWAP00000005424
annotation not available
   
 0.996
MLH3
mutL homolog 3.
  
 0.990
MLH1
mutL homolog 1.
  
 0.971
RAD51
RAD51 recombinase.
   
 0.947
PMS1
PMS1 homolog 1, mismatch repair system component.
 
 0.943
FANCM
FA complementation group M.
    
 
 0.907
PMS2
PMS1 homolog 2, mismatch repair system component.
 
 0.907
SPO11
SPO11 initiator of meiotic double stranded breaks.
   
 
 0.899
BLM
BLM RecQ like helicase.
  
 0.889
TOP3A
DNA topoisomerase III alpha.
   
 0.884
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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