STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB34RAB34, member RAS oncogene family. (259 aa)    
Predicted Functional Partners:
COG6
Component of oligomeric golgi complex 6.
   
 0.917
ARL1
ADP ribosylation factor like GTPase 1.
   
 0.915
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
   
 0.914
VPS52
VPS52 subunit of GARP complex.
    
 0.907
VPS53
VPS53 subunit of GARP complex.
    
 0.901
RGP1
RGP1 homolog, RAB6A GEF complex partner 1.
    
 0.890
ENSCWAP00000004555
annotation not available
    
 0.863
GDI2
GDP dissociation inhibitor 2.
   
 0.854
GDI1
GDP dissociation inhibitor 1.
   
 0.854
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.851
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.