STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE3CUbiquitin protein ligase E3C. (1084 aa)    
Predicted Functional Partners:
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 0.978
UBB
Ubiquitin B.
    
 0.962
PSMD4
Proteasome 26S subunit, non-ATPase 4.
    
 
 0.960
PSMD14
Proteasome 26S subunit, non-ATPase 14.
    
 
 0.955
PSMD2
Proteasome 26S subunit, non-ATPase 2.
    
 
 0.955
ADRM1
Adhesion regulating molecule 1.
    
 
 0.886
PSMC5
Proteasome 26S subunit, ATPase 5.
    
 
 0.860
USP14
Ubiquitin specific peptidase 14.
    
 
 0.854
ENSCWAP00000017727
annotation not available
    
 0.854
ENSCWAP00000026834
annotation not available
    
 0.854
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.