STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE3CUbiquitin protein ligase E3C. (1084 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
    
 0.882
TRIP12
Thyroid hormone receptor interactor 12.
   
 
0.865
UBE2D2
Ubiquitin conjugating enzyme E2 D2.
    
 
 0.838
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 
 0.836
PSMD14
Proteasome 26S subunit, non-ATPase 14.
    
 
 0.826
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
   
    0.781
SLC30A9
Solute carrier family 30 member 9.
      
 0.778
PSMD2
Proteasome 26S subunit, non-ATPase 2.
    
 
 0.751
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
 0.727
UBE3B
Ubiquitin protein ligase E3B.
   
 
0.717
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.