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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSER1Oxidative stress responsive serine rich 1. (291 aa)    
Predicted Functional Partners:
SLC5A9
Solute carrier family 5 member 9.
      
 0.597
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
      
 0.597
GOLT1B
Golgi transport 1B.
      
 0.597
SLC35B1
Solute carrier family 35 member B1.
      
 0.597
ENSCWAP00000015618
annotation not available
      
 0.562
TTC19
Tetratricopeptide repeat domain 19.
      
 0.560
STK38
Serine/threonine kinase 38.
      
 0.546
HCCS
Holocytochrome c synthase.
      
 0.491
KDM8
Lysine demethylase 8.
      
 0.489
SNX2
Sorting nexin 2.
      
 0.483
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.