STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMPRSS4Transmembrane serine protease 4. (435 aa)    
Predicted Functional Partners:
SPINT2
Serine peptidase inhibitor, Kunitz type 2.
    
  0.640
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.554
MST1R
Macrophage stimulating 1 receptor.
    
  0.554
F3
Coagulation factor III, tissue factor.
    
 0.553
F2RL3
F2R like thrombin or trypsin receptor 3.
    
  0.541
GGCX
Gamma-glutamyl carboxylase.
    
  0.536
SPINT1
Serine peptidase inhibitor, Kunitz type 1.
    
  0.528
NME8
NME/NM23 family member 8.
    
 
 0.527
F12
Coagulation factor XII.
  
 
 
0.517
TNS3
Tensin 3.
    
  0.507
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.