STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIP12Thyroid hormone receptor interactor 12. (2040 aa)    
Predicted Functional Partners:
UBR1
Ubiquitin protein ligase E3 component n-recognin 1.
   
 0.996
UBR2
Ubiquitin protein ligase E3 component n-recognin 2.
   
 0.996
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
  0.985
USP34
Ubiquitin specific peptidase 34.
   
 
 0.982
ENSCWAP00000006692
annotation not available
    
 0.979
RPS27A
Ribosomal protein S27a.
    
 0.979
ENSCWAP00000022461
annotation not available
    
 0.979
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
   
 0.979
USP7
Ubiquitin specific peptidase 7.
   
 
 0.978
PSMC5
Proteasome 26S subunit, ATPase 5.
    
 
 0.969
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.