STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NALCNSodium leak channel, non-selective. (1738 aa)    
Predicted Functional Partners:
UNC80
Unc-80 homolog, NALCN channel complex subunit.
   
 0.999
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.999
FAM155B
Family with sequence similarity 155 member B.
   
 
 0.978
SCN1B
Sodium voltage-gated channel beta subunit 1.
    
 0.812
WDR35
WD repeat domain 35.
    
 0.807
IFT122
Intraflagellar transport 122.
   
 0.797
WDR19
WD repeat domain 19.
    
 0.789
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
 0.773
ENSCWAP00000019891
annotation not available
   
 0.773
CACNB3
Calcium voltage-gated channel auxiliary subunit beta 3.
   
 0.773
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.