STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCF19Transcription factor 19. (346 aa)    
Predicted Functional Partners:
RNF39
Ring finger protein 39.
      
 0.805
CDK1
Cyclin dependent kinase 1.
   
  
 0.798
CDCA8
Cell division cycle associated 8.
   
  
 0.789
EPHX2
Epoxide hydrolase 2.
  
 
 0.785
MCM3
Minichromosome maintenance complex component 3.
   
    0.785
MTA3
Metastasis associated 1 family member 3.
    
   0.783
RRM2
Ribonucleotide reductase regulatory subunit M2.
   
  
 0.776
BIRC5
Baculoviral IAP repeat containing 5.
   
    0.776
GATAD2B
GATA zinc finger domain containing 2B.
    
   0.773
KIF20A
Kinesin family member 20A.
   
  
 0.770
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.