STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARHL1BarH like homeobox 1. (327 aa)    
Predicted Functional Partners:
ATOH1
Atonal bHLH transcription factor 1.
   
 
 0.644
IRX3
Iroquois homeobox 3.
    
 
 0.608
ASTN1
Astrotactin 1.
    
 
 0.597
PTF1A
Pancreas associated transcription factor 1a.
      
 0.586
EYA1
EYA transcriptional coactivator and phosphatase 1.
    
 
 0.580
HOMEZ
Homeobox and leucine zipper encoding.
    
 
 0.533
ENSCWAP00000004776
annotation not available
    
  0.525
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
      
 0.525
LHX5
LIM homeobox 5.
    
 
 0.521
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
   0.515
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.