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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHLDA1Pleckstrin homology like domain family A member 1. (389 aa)    
Predicted Functional Partners:
AURKA
Aurora kinase A.
     
 0.951
TAF1C
TATA-box binding protein associated factor, RNA polymerase I subunit C.
      
 0.538
ANKRD34C
Ankyrin repeat domain 34C.
      
 0.476
LRRTM1
Leucine rich repeat transmembrane neuronal 1.
      
 0.461
PLCXD3
Phosphatidylinositol specific phospholipase C X domain containing 3.
      
 0.459
SORCS3
Sortilin related VPS10 domain containing receptor 3.
      
 0.459
IER3
Immediate early response 3.
   
  
 0.442
FJX1
Four-jointed box kinase 1.
      
 0.442
ZNF395
Zinc finger protein 395.
      
 0.435
PHF21A
PHD finger protein 21A.
      
 0.408
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.