STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSPT2G1 to S phase transition 2. (631 aa)    
Predicted Functional Partners:
ETF1
Eukaryotic translation termination factor 1.
   
 0.998
UPF1
UPF1 RNA helicase and ATPase.
    
 0.981
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
    
 
 0.970
ZGRF1
Zinc finger GRF-type containing 1.
    
 0.955
RBM12B
RNA binding motif protein 12B.
    
 
 0.947
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.941
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
    
 
 0.922
CRBN
Cereblon.
    
 
 0.905
PABPC4
poly(A) binding protein cytoplasmic 4.
   
 0.901
PABPC1L
poly(A) binding protein cytoplasmic 1 like.
   
 0.901
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.