STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVL9AVL9 cell migration associated. (649 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
      
 0.884
RAB30
RAB30, member RAS oncogene family.
      
 0.841
DENND10
DENN domain containing 10.
      
 0.790
DENND11
DENN domain containing 11.
      
 0.755
RAB33B
RAB33B, member RAS oncogene family.
      
 0.754
DENND6A
DENN domain containing 6A.
      
 0.721
RAB33A
RAB33A, member RAS oncogene family.
      
 0.712
DENND2A
DENN domain containing 2A.
      
 0.634
DENND1C
DENN domain containing 1C.
      
 0.626
DENND4B
DENN domain containing 4B.
      
 0.600
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.