STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RHBDL2Rhomboid like 2. (304 aa)    
Predicted Functional Partners:
EFNB3
Ephrin B3.
    
 
 0.680
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
   
 
 0.640
ADAM10
ADAM metallopeptidase domain 10.
    
 0.638
ANKRD22
Ankyrin repeat domain 22.
      
 0.630
SRPK3
SRSF protein kinase 3.
      
 0.629
STOML3
Stomatin like 3.
    
 0.617
ADAM17
ADAM metallopeptidase domain 17.
    
 0.611
EPHB4
EPH receptor B4.
      
 0.609
ENSCWAP00000016430
annotation not available
      
 0.604
WDR5B
WD repeat domain 5B.
      
 0.598
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.