STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BDNFBrain derived neurotrophic factor. (330 aa)    
Predicted Functional Partners:
NTRK2
Neurotrophic receptor tyrosine kinase 2.
   
 0.999
NTF4
Neurotrophin 4.
    
 0.990
NTRK3
Neurotrophic receptor tyrosine kinase 3.
   
 0.988
NTRK1
Neurotrophic receptor tyrosine kinase 1.
   
 0.986
SORT1
Sortilin 1.
    
 
 0.977
NGFR
Nerve growth factor receptor.
    
 0.972
NGF
Nerve growth factor.
   
 0.964
NTF3
Neurotrophin 3.
   
 0.944
ATP7A
ATPase copper transporting alpha.
      
 0.943
PDGFRA
Platelet derived growth factor receptor alpha.
     
 0.924
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.