STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDSNCorneodesmosin. (487 aa)    
Predicted Functional Partners:
TGM1
Transglutaminase 1.
   
 
 0.839
PPL
Periplakin.
     
 0.823
DSG1
Desmoglein 1.
   
 
 0.813
ENSCWAP00000027361
annotation not available
     
 0.813
TGM5
Transglutaminase 5.
   
 
 0.767
SERPINB8
Serpin family B member 8.
      
 0.748
CASP14
Caspase 14.
    
 0.747
ENSCWAP00000003806
annotation not available
   
 
 0.704
KLK7
Kallikrein related peptidase 7.
   
 
 0.695
DSC1
Desmocollin 1.
    
 
 0.688
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.