STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRPD1Small nuclear ribonucleoprotein D1 polypeptide. (119 aa)    
Predicted Functional Partners:
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.999
ENSCWAP00000010435
annotation not available
   
0.999
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.999
ENSCWAP00000000357
annotation not available
   
 0.997
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
   
 0.997
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
   
 0.996
LSM8
LSM8 homolog, U6 small nuclear RNA associated.
   
 0.995
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 0.995
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.995
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.995
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.