STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000008243annotation not available (325 aa)    
Predicted Functional Partners:
PLEKHM3
Pleckstrin homology domain containing M3.
 
   
  0.932
ENSCWAP00000008210
annotation not available
 
      0.899
UVRAG
UV radiation resistance associated.
    
 0.803
DEF8
Differentially expressed in FDCP 8 homolog.
 
  
   0.799
MAP1LC3C
Microtubule associated protein 1 light chain 3 gamma.
    
 
 0.774
VPS39
VPS39 subunit of HOPS complex.
    
 
 0.728
VPS11
VPS11 core subunit of CORVET and HOPS complexes.
    
 
 0.725
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
   
 
 0.695
ARL8B
ADP ribosylation factor like GTPase 8B.
    
 
 0.662
ARHGAP27
Rho GTPase activating protein 27.
   
  
 0.650
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.