STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGBL4ATP/GTP binding protein like 4. (495 aa)    
Predicted Functional Partners:
RABAC1
Rab acceptor 1.
      
 0.614
TTLL4
Tubulin tyrosine ligase like 4.
    
 
 0.607
SYT17
Synaptotagmin 17.
      
 0.605
CEP63
Centrosomal protein 63.
      
 0.598
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
      
 0.597
LPCAT3
Lysophosphatidylcholine acyltransferase 3.
      
 0.594
BEND5
BEN domain containing 5.
 
    
 0.579
ERAL1
Era like 12S mitochondrial rRNA chaperone 1.
   
 
 0.552
MRPS27
Mitochondrial ribosomal protein S27.
     
 0.543
DPP9
Dipeptidyl peptidase 9.
      
 0.529
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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