STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB42RAB42, member RAS oncogene family. (220 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.927
ITSN1
Intersectin 1.
    
 0.897
SHANK1
SH3 and multiple ankyrin repeat domains 1.
    
 0.738
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 0.738
ENSCWAP00000010697
annotation not available
   
 0.726
TRIO
Trio Rho guanine nucleotide exchange factor.
   
 0.726
KALRN
Kalirin RhoGEF kinase.
   
 0.726
ARHGAP1
Rho GTPase activating protein 1.
    
 0.721
MYO9A
Myosin IXA.
    
 0.713
MYO9B
Myosin IXB.
    
 0.713
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.