STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE5Copine 5. (593 aa)    
Predicted Functional Partners:
RNASEH2B
Ribonuclease H2 subunit B.
   
 0.829
RNASEH2A
Ribonuclease H2 subunit A.
   
 0.799
ATAD3A
ATPase family AAA domain containing 3A.
      
 0.752
TMBIM6
Transmembrane BAX inhibitor motif containing 6.
      
 0.681
MYH3
Myosin heavy chain 3.
   
  
 0.625
GPR149
G protein-coupled receptor 149.
   
  
 0.618
ACTN2
Actinin alpha 2.
     
 0.596
RBM15
RNA binding motif protein 15.
      
 0.594
YPEL5
Yippee like 5.
   
  
 0.554
MMS22L
MMS22 like, DNA repair protein.
      
 0.552
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.