STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUGCTsuccinyl-CoA:glutarate-CoA transferase. (445 aa)    
Predicted Functional Partners:
GCDH
glutaryl-CoA dehydrogenase.
 
 
 0.940
HSDL2
Hydroxysteroid dehydrogenase like 2.
   
 0.891
ILVBL
ilvB acetolactate synthase like.
  
 
 0.883
HACL1
2-hydroxyacyl-CoA lyase 1.
  
 
 0.883
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
     
 0.850
IYD
Iodotyrosine deiodinase.
   
 
 0.843
ENSCWAP00000004776
annotation not available
    
 0.834
SCP2
Sterol carrier protein 2.
  
 
 0.825
RFK
Riboflavin kinase.
   
 
  0.823
MECR
Mitochondrial trans-2-enoyl-CoA reductase.
     
 0.812
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.